Biology
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Item The Impact of Marsh Sill Living Shorelines on Coastal Resilience and Stability: Insights from Maryland's Chesapeake Bay and Coastal Bays(2024) Sun, Limin; Nardin, William WN; Palinkas, Cindy CP; Marine-Estuarine-Environmental Sciences; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)Climate change and coastal urbanization are accelerating the demand for strategies to reduce shoreline erosion and enhance coastal resilience to storms and sea-level rise. Generally adverse ecological impacts of hardened infrastructure (e.g., seawalls, revetments, and dikes) have led to growing interest in alternative solutions. Living shorelines, increasingly recognized as sustainable Natural and Nature-Based Features (NNBFs; or Nature-Based Solutions (NBSs)) for their dual benefits of stabilizing shorelines while preserving or restoring coastal habitats, represent a promising approach to shoreline stabilization. Marsh sill living shorelines (created marshes with adjacent rock sills) have been extensively constructed in the Chesapeake Bay, notably in Maryland. Despite their popularity, significant uncertainties remain regarding their effectiveness and resiliency, especially during high-energy events. This dissertation investigates the dynamics of marsh sill living shorelines in Maryland’s Chesapeake Bay and Coastal Bays, aiming to fill knowledge gaps and inform effective shoreline stabilization strategies. First, the dissertation examines marsh boundary degradation into open water during high-energy conditions, contrasting mechanisms between living shorelines and natural marshes. Field surveys and numerical modeling reveal that while natural marshes experience erosion through undercutting and slumping at the scarp toe, living shorelines degrade primarily through open-water conversion at the marsh boundary behind rock sills. Differences in sediment characteristics and vegetation between the two ecosystems drive variations in marsh boundary stability between them. Next, the study assesses the impacts of rock sill placement on sediment dynamics and shoreline stability, highlighting the role of tidal gaps in enhancing sediment flux to the marsh and increasing vertical accretion during high-energy events. Numerical modeling demonstrates that while continuous sills mitigate erosion at the marsh edge of living shorelines, they diminish sediment deposition on the marsh platform compared to segmented sills with tidal gaps. Finally, the research identifies key factors driving marsh boundary degradation that are needed to assess the stability of marsh sill living shorelines. Analysis of eco-geomorphic features and hydrodynamics across 18 living shoreline sites reveals that metrics such as the Unvegetated/Vegetated Ratio (UVVR) and sediment deposition rate often used to assess the resilience of natural marshes also apply to the created marshes of living shorelines. Multivariate analyses further reveal that the Relative Exposure Index (REI) and Gap/Rock (G/R) ratio are crucial predictors of shoreline stability in marsh sill living shorelines, and thus should be particularly considered in shoreline design. By integrating remote sensing, field observations, and numerical modeling, this dissertation advances the understanding of sediment dynamics and stability in living shorelines and provides actionable insights for effective shoreline design and management to promote coastal resilience.Item SEX DIFFERENCES IN THE FOREBRAIN DOPAMINERGIC CIRCUIT(2022) Manion, Matthew Timothy Coon; Glasper, Erica R; Wang, Kuan Hong; Neuroscience and Cognitive Science; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)Several psychiatric disorders exhibit different incidence rates in men and women and areassociated with dysfunctions in forebrain dopaminergic circuits. Although anatomical and functional sex differences in the brain have been studied, little is known about sex differences in the forebrain dopaminergic circuits associated with behavioral dysfunction. We hypothesized that known sex differences in forebrain dopamine circuit-associated behaviors would be the result of sex differences in forebrain dopamine circuit anatomy. As a first step to address this hypothesis, we combined a mouse transgenic driver line (tyrosine hydroxylase promoter-driven Cre recombinase) with virally encoded fluorescent reporters (FLEX-tdTomato and SynaptophysinGFP) to compare the density of midbrain dopaminergic axon projections and terminal boutons in dopamine projection target regions. Using this technique, we analyzed projections from the ventral tegmental area (VTA) to prefrontal cortex and basolateral amygdala (BLA) in male and female adult mice. Multiple analyses at 10x and 25x magnification revealed higher bouton density in BLA in males compared to females. To determine if this anatomical difference is mediated by gonadal steroid hormones, subjects were treated with a drug used to reduce gonadal steroid hormone production in clinical populations, leuprolide acetate (Lupron), before anatomical measures. Leuprolide administration resulted in a reduction in circulating testosterone, but did not show an effect on dopamine circuit anatomy. The finding of an anatomical sex difference in the forebrain dopamine circuit provides a structural foundation for further investigation of how sex differences in brain circuits may underlie behavioral dysfunction that play roles in psychiatric illnesses.Item TAXONOMY, MORPHOLOGY, AND RNA-SEQ TRANSCRIPTOMICS OF THE CUBOZOAN ALATINA ALATA, AN EMERGING MODEL CNIDARIAN(2016) Ames, Cheryl L; Bely, Alexandra E; Collins, Allen G; Behavior, Ecology, Evolution and Systematics; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)Cnidarians are often considered simple animals, but the more than 13,000 estimated species (e.g., corals, hydroids and jellyfish) of the early diverging phylum exhibit a broad diversity of forms, functions and behaviors, some of which are demonstrably complex. In particular, cubozoans (box jellyfish) are cnidarians that have evolved a number of distinguishing features. Some cubozoan species possess complex mating behaviors or particularly potent stings, and all possess well-developed light sensation involving image-forming eyes. Like all cnidarians, cubozoans have specialized subcellular structures called nematocysts that are used in prey capture and defense. The objective of this study is to contribute to the development of the box jellyfish Alatina alata as a model cnidarian. This cubozoan species offers numerous advantages for investigating morphological and molecular traits underlying complex processes and coordinated behavior in free-living medusozoans (i.e., jellyfish), and more broadly throughout Metazoa. First, I provide an overview of Cnidaria with an emphasis on the current understanding of genes and proteins implicated in complex biological processes in a few select cnidarians. Second, to further develop resources for A. alata, I provide a formal redescription of this cubozoan and establish a neotype specimen voucher, which serve to stabilize the taxonomy of the species. Third, I generate the first functionally annotated transcriptome of adult and larval A. alata tissue and apply preliminary differential expression analyses to identify candidate genes implicated broadly in biological processes related to prey capture and defense, vision and the phototransduction pathway and sexual reproduction and gametogenesis. Fourth, to better understand venom diversity and mechanisms controlling venom synthesis in A. alata, I use bioinformatics to investigate gene candidates with dual roles in venom and digestion, and review the biology of prey capture and digestion in cubozoans. The morphological and molecular resources presented herein contribute to understanding the evolution of cubozoan characteristics and serve to facilitate further research on this emerging cubozoan model.Item Effects of Sea Level Rise on Tidal Marshes(2014) Bryan, Jennifer; Harris, Lora; Marine-Estuarine-Environmental Sciences; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)There is growing concern regarding the potentially negative impacts of sea level rise (SLR) on tidal wetlands in the Mid-Atlantic region of the United States. In Chapter one, I investigate the phenotypic plasticity and biomechanical properties of Zizania aquatica under experimental inundation treatments. At lower elevations and higher inundation designed to simulate SLR, Zizania aquatica did indeed respond with phenotypic changes such as increased height and stem thickness, and decreased stem density, areal aboveground biomass, and modulus of elasticity. In Chapter two, I investigate the nitrogen removal role of Chesapeake Bay tidal wetlands under current and simulated long-term SLR. I also examine nitrogen removal at smaller scales in Maryland, comparing restoration goals for nitrogen loading reductions with the loss of nitrogen removal services expected by 2025. Tidal wetlands are expected to decrease in the Bay and Maryland and associated loss of nitrogen removal services may affect attainment of restoration goals.Item STUDIES OF PERIPHYTIC ALGAE ON ALGAL TURF SCRUBBERSTM ALONG THE CHESAPEAKE BAY: COMMUNITY STRUCTURE, SYSTEMATICS, AND INFLUENCING FACTORS(2012) Laughinghouse, Haywood Dail; Kangas, Patrick C; Marine-Estuarine-Environmental Sciences; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)This is an ecological and systematic study of periphytic algae growing in an ecologically-engineered system used for water quality improvement: the Algal Turf Scrubber or ATSTM. This technology consists of an attached algal community growing on screens in a shallow floway through which water is pumped. The study was conducted on small-scale, experimental floways at three sites within the Chesapeake Bay watershed: on the Susquehanna River in southeastern Pennsylvania (freshwater) and on the Great Wicomico and York Rivers in Virginia (brackish water). A total of 330 taxa were identified at the sites from 2008-2011. The majority of taxa at all three sites belonged to the phylum Bacillariophyta, but a large number of taxa from Chlorophyta and, to a lesser degree, Cyanobacteria were also found at the freshwater site. Algae found in the ATSTM exhibited a diversity of life forms and modes of attachment within the community. Although these system appear to be dominated by a "canopy" of attached, filamentous species, more than half of the total abundance (cell density) were solitary, unattached taxa that grow as an "understory" within the three dimensional structure of the community. Longitudinal patterns were examined on the longest floways (90 m long) at the freshwater site. The community nutrient uptake rate (mass of nitrogen or phosphorus m-2 day-1) for the harvested algal biomass was found to decline from the top to the bottom of the floway for a system constructed at 2% slope but no distinct pattern was found for a system constructed at 1% slope. The majority of algal taxa were evenly distributed along the floway from top to the bottom, in terms of frequency of occurrence, suggesting a general lack of longitudinal specialization within the community. A detailed review of the systematics of the Order Oscillatoriales (Cyanobacteria) found on the ATSTM was undertaken since this group has not been studied much in the Chesapeake Bay watershed. Twenty-four taxa were examined, described morphologically and their nomenclature reviewed. Comparing 16s rRNA gene analyses of planktonic and periphytic Pseudanabaena, it was suggested that periphytic Pseudanabaena be revised and elevated to a new genus, Ilyonema.