MODEL COMPOUNDS GUIDE AFFINITY MEASUREMENT OF BERYLLIUM AND CALCIUM INTERACTIONS WITH PHOSPHOLIPIDS

dc.contributor.advisorKlauda, Jeffery Ben_US
dc.contributor.advisorSukharev, Sergeien_US
dc.contributor.authorDavoudi, Omiden_US
dc.contributor.departmentChemical Engineeringen_US
dc.contributor.publisherDigital Repository at the University of Marylanden_US
dc.contributor.publisherUniversity of Maryland (College Park, Md.)en_US
dc.date.accessioned2023-06-23T06:23:35Z
dc.date.available2023-06-23T06:23:35Z
dc.date.issued2023en_US
dc.description.abstractDivalent cations bound to anionic lipids are necessary co-factors for many signaling mechanisms taking place at both the inner and outer surfaces of the cytoplasmic membrane. Coordination of divalent ions jointly by phospholipid headgroups and specific protein domains mediates recognition and triggers secondary messenger cascades or membrane fusion events. Phosphoryl oxygens of phospholipids are common contributors to divalent ion coordination. With the aims of elucidating the affinities of the calcium ion Ca(2+) and its toxic competitor beryllium Be(2+) to different types of phosphate groups taking place in many ‘building blocks’ of the cell, improving simulation force fields and better understanding the nature of beryllium toxicity, here we use isothermal titration calorimetry (ITC) to study the thermodynamic parameters and coordination of these ions by phosphates. Particularly, we focus on the differences between phosphates in the phosphodiester configuration that connect the glycerol backbone with a headgroup (as in phosphatidylglycerol, PG) and terminal monoester phosphates such as in phosphatidic acid (PA) and most phosphorylated proteins. The comparison of small model compounds, dimethyl phosphate (DMP, mimicking phosphate in phosphatidyl glycerol) with glycerol-3-phosphate (Gly3P, emulating phosphate in phosphatidic acid) shows that the affinity of Be(2+) for Gly3P is about one order of magnitude higher than for DMP and may exhibit at least two binding configurations. The Be(2+) -DMP thermograms in most cases are well fitted with a one-site model. Upon completing the survey of small (model) compounds, we performed experiments to compare the binding parameters of Be(2+) to POPA and to POPG-containing liposomes with the parameters obtained on respective model compounds. We also present several pilot binding experiments performed with POPS liposomes; however, the fit is poor.en_US
dc.identifierhttps://doi.org/10.13016/dspace/m6ol-xnre
dc.identifier.urihttp://hdl.handle.net/1903/30067
dc.language.isoenen_US
dc.subject.pqcontrolledChemical engineeringen_US
dc.subject.pqcontrolledPhysical chemistryen_US
dc.subject.pquncontrolledBerylliumen_US
dc.subject.pquncontrolledbinding affinityen_US
dc.subject.pquncontrolledion-lipid interactionen_US
dc.subject.pquncontrolledIsothermal Titration Calorimetryen_US
dc.subject.pquncontrolledlipid clusteringen_US
dc.subject.pquncontrolledlipid dehydrationen_US
dc.titleMODEL COMPOUNDS GUIDE AFFINITY MEASUREMENT OF BERYLLIUM AND CALCIUM INTERACTIONS WITH PHOSPHOLIPIDSen_US
dc.typeThesisen_US

Files

Original bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
Davoudi_umd_0117N_23445.pdf
Size:
6.92 MB
Format:
Adobe Portable Document Format