Data for "A tug of war between filament treadmilling and myosin induced contractility generates actin ring"

dc.contributor.advisorUpadhyaya, Arpita
dc.contributor.advisorPapoian, Garegin A.
dc.contributor.authorNi, Qin
dc.contributor.authorWagh, Kaustubh
dc.contributor.authorPathni, Aashli
dc.contributor.authorNi, Haoran
dc.contributor.authorVashisht, Vishavdeep
dc.contributor.authorUpadhyaya, Arpita
dc.contributor.authorPapoian, Garegin A.
dc.date.accessioned2022-08-16T19:54:27Z
dc.date.available2022-08-16T19:54:27Z
dc.date.issued2022-06-23
dc.descriptionExperimental data and simulation codes for the paper "A tug of war between filament treadmilling and myosin induced contractility generates actin ring." https://doi.org/10.1101/2021.06.06.447254en_US
dc.description.abstractIn most eukaryotic cells, actin filaments assemble into a shell-like actin cortex under the plasma membrane, controlling cellular morphology, mechanics, and signaling. The actin cortex is highly polymorphic, adopting diverse forms such as the ring-like structures found in podosomes, axonal rings, and immune synapses. The biophysical principles that underlie the formation of actin rings and cortices remain unknown. Using a molecular simulation platform, called MEDYAN, we discovered that varying the filament treadmilling rate and myosin concentration induces a finite size phase transition in actomyosin network structures. We found that actomyosin networks condense into clusters at low treadmilling rates or high myosin concentration but form ring-like or cortex-like structures at high treadmilling rates and low myosin concentration. This mechanism is supported by our corroborating experiments on live T cells, which exhibit ring-like actin networks upon activation by stimulatory antibody. Upon disruption of filament treadmilling or enhancement of myosin activity, the pre-existing actin rings are disrupted into actin clusters or collapse towards the network center respectively. Our analyses suggest that the ring-like actin structure is a preferred state of low mechanical energy, which is, importantly, only reachable at sufficiently high treadmilling rates.en_US
dc.description.sponsorshipThis work was supported by the following grants: * NSF CHE-1800418 * NSF PHY-1806903en_US
dc.identifierhttps://doi.org/10.13016/9t26-ovid
dc.identifier.urihttp://hdl.handle.net/1903/29089
dc.language.isoen_USen_US
dc.relation.isAvailableAtCollege of Computer, Mathematical & Natural Sciencesen_us
dc.relation.isAvailableAtPhysicsen_us
dc.relation.isAvailableAtDigital Repository at the University of Marylanden_us
dc.relation.isAvailableAtUniversity of Maryland (College Park, MD)en_us
dc.subjectMEDYANen_US
dc.subjectsimulationen_US
dc.subjectcytoskeletonen_US
dc.subjectactinen_US
dc.titleData for "A tug of war between filament treadmilling and myosin induced contractility generates actin ring"en_US
dc.typeSoftwareen_US

Files

Original bundle

Now showing 1 - 4 of 4
No Thumbnail Available
Name:
README.md
Size:
2.24 KB
Format:
Unknown data format
Description:
No Thumbnail Available
Name:
medyan-d127a00ac0c231374a88104faa2202139473e59e.zip
Size:
932.85 KB
Format:
Unknown data format
Description:
No Thumbnail Available
Name:
Figure4.zip
Size:
112.54 KB
Format:
Unknown data format
Description:
No Thumbnail Available
Name:
Figure5.zip
Size:
627.63 MB
Format:
Unknown data format
Description: