Data for "A tug of war between filament treadmilling and myosin induced contractility generates actin ring"
dc.contributor.advisor | Upadhyaya, Arpita | |
dc.contributor.advisor | Papoian, Garegin A. | |
dc.contributor.author | Ni, Qin | |
dc.contributor.author | Wagh, Kaustubh | |
dc.contributor.author | Pathni, Aashli | |
dc.contributor.author | Ni, Haoran | |
dc.contributor.author | Vashisht, Vishavdeep | |
dc.contributor.author | Upadhyaya, Arpita | |
dc.contributor.author | Papoian, Garegin A. | |
dc.date.accessioned | 2022-08-16T19:54:27Z | |
dc.date.available | 2022-08-16T19:54:27Z | |
dc.date.issued | 2022-06-23 | |
dc.description | Experimental data and simulation codes for the paper "A tug of war between filament treadmilling and myosin induced contractility generates actin ring." https://doi.org/10.1101/2021.06.06.447254 | en_US |
dc.description.abstract | In most eukaryotic cells, actin filaments assemble into a shell-like actin cortex under the plasma membrane, controlling cellular morphology, mechanics, and signaling. The actin cortex is highly polymorphic, adopting diverse forms such as the ring-like structures found in podosomes, axonal rings, and immune synapses. The biophysical principles that underlie the formation of actin rings and cortices remain unknown. Using a molecular simulation platform, called MEDYAN, we discovered that varying the filament treadmilling rate and myosin concentration induces a finite size phase transition in actomyosin network structures. We found that actomyosin networks condense into clusters at low treadmilling rates or high myosin concentration but form ring-like or cortex-like structures at high treadmilling rates and low myosin concentration. This mechanism is supported by our corroborating experiments on live T cells, which exhibit ring-like actin networks upon activation by stimulatory antibody. Upon disruption of filament treadmilling or enhancement of myosin activity, the pre-existing actin rings are disrupted into actin clusters or collapse towards the network center respectively. Our analyses suggest that the ring-like actin structure is a preferred state of low mechanical energy, which is, importantly, only reachable at sufficiently high treadmilling rates. | en_US |
dc.description.sponsorship | This work was supported by the following grants: * NSF CHE-1800418 * NSF PHY-1806903 | en_US |
dc.identifier | https://doi.org/10.13016/9t26-ovid | |
dc.identifier.uri | http://hdl.handle.net/1903/29089 | |
dc.language.iso | en_US | en_US |
dc.relation.isAvailableAt | College of Computer, Mathematical & Natural Sciences | en_us |
dc.relation.isAvailableAt | Physics | en_us |
dc.relation.isAvailableAt | Digital Repository at the University of Maryland | en_us |
dc.relation.isAvailableAt | University of Maryland (College Park, MD) | en_us |
dc.subject | MEDYAN | en_US |
dc.subject | simulation | en_US |
dc.subject | cytoskeleton | en_US |
dc.subject | actin | en_US |
dc.title | Data for "A tug of war between filament treadmilling and myosin induced contractility generates actin ring" | en_US |
dc.type | Software | en_US |
Files
Original bundle
1 - 4 of 4
No Thumbnail Available
- Name:
- medyan-d127a00ac0c231374a88104faa2202139473e59e.zip
- Size:
- 932.85 KB
- Format:
- Unknown data format
- Description:
No Thumbnail Available
- Name:
- Figure4.zip
- Size:
- 112.54 KB
- Format:
- Unknown data format
- Description:
No Thumbnail Available
- Name:
- Figure5.zip
- Size:
- 627.63 MB
- Format:
- Unknown data format
- Description: