College of Agriculture & Natural Resources
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The collections in this community comprise faculty research works, as well as graduate theses and dissertations.
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Item Three Clostridium species with Health Imparting Properties: In vitro Screening for Probiotic Potential(2024) Mochama, Victor Moronge; Obanda, Diana; Nutrition; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)This research aimed to unlock the probiotic potential of the genus Clostridium, which is often overshadowed by the predominant focus on pathogenic species. The study specifically targeted three promising Clostridium species: C. disporicum, C. celatum, and C. vincentii, which have shown potential in mitigating diet-induced obesity. Despite the challenges presented by the anaerobic growth requirements of Clostridium bacteria, the study capitalized on their capacity to sporulate. This characteristic provides an avenue to use them as probiotics, with resilient and dormant spores capable of surviving food processing and harsh stomach conditions. The resilience of these spores was examined by exposing them to oxygen, heat, gastrointestinal juices, and bile salts. The spores survived oxygen exposure, exhibited resilience to both bile salts and gastric acids, and demonstrated a survival temperature of 70°C. When exposed to suitable germination conditions in vitro, the spores successfully germinated. The study assessed the colonization potential of the bacteria by evaluating their adhesion ability, and all bacteria were found to have the adhesion ability. Furthermore, a safety assessment was conducted by examining hemolytic activity and antibiotic susceptibility to selected antibiotics. The bacteria were found to be susceptible to the antibiotics and did not exhibit hemolytic activity. Bile salt hydrolase (BSH) activity and antibacterial activities were also assessed, and none of the bacteria exhibited BSH activity or antibacterial activity. Antioxidant tests revealed that C. vincentii had the highest antioxidant properties. Assessment of anti-inflammatory properties showed that C. celatum downregulated the gene expression of cytokine inflammation markers IL-6, IL-1, and iNOS while upregulating TGF-β expression. In summary all 3 bacterial species showed good probiotic potential from the in vitro tests. Particularly the formation of resistant spores that later germinated to vegetative cells that produced molecular patterns with antioxidant and anti-inflammatory properties. This necessitates further studies on their probiotic properties.Item FERMENTING KALE VEGETABLE (Brassica oleracea Var Sabella) IMPROVES ITS PROPERTIES AS A FUNCTIONAL FOOD(2023) Subedi, Ujjwol; Obanda, Diana; Food Science; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)The properties of kale as a functional food are well known. Fermentation is a process that has been shown to improve the health impacts of foods. In this study, we sought to determine how fermentation further improves or augments the functional food properties of kale. We tested six different fermentation methods which included traditional practices and inoculation with different bacterial species and compared outcomes to the unfermented control. After 16 days of fermentation, we quantified (i) selected bioactive components and (ii) anti-nutritional factors. We then determined (i) the antioxidant capacity of the whole vegetable, (ii) the microbiota composition of the vegetable, and (iii) the anti-inflammation capacity of the ethanolic extract of the vegetable. Fermentation significantly increased (i) the quantities of total polyphenols from 8.54 to 10.71 mg GAE/g (ii) sulforaphane from 960.8 ± 41.76 to 1777 ± 45.95 μg/g, and (iii) antioxidant capacity from 61.99 to 67.37 % respectively, and antinutritional factors oxalate and tannin content significantly reduced by 49 % and 29.83 % respectively. Fermented kale extract exhibited potent anti-inflammatory effects in macrophages by reducing the iNOS expression by 84.3% and TNF-α, IL-1β, and IL-6 mRNA levels by 62, 68, and 85.5 %, respectively. Fermenting kale changed the surface microbiota by reducing the population of the inflammation-inducing Proteobacteria while increasing health-promoting Firmicutes; including Lactobacillus. All fermentation methods had a beneficial impact compared to the unfermented control, but the mixed culture of L. lactis and L. acidophilus was the most effective. In summary, fermenting enhanced the health benefits of kale by increasing the concentration of total polyphenol, sulforaphane content, antioxidant capacity, anti-inflammation capacity, and reducing the quantity of anti-nutritional factors. Furthermore, it promoted the prebiotic and/or probiotic vehicle properties of the vegetable by changing the proportion of beneficial bacteria and those associated with inflammation.Item Analysis of the fecal microbiota of fast- and slow-growing rainbow trout (Oncorhynchus mykiss)(Springer Nature, 2019-10-29) Chapagain, Pratima; Arivett, Brock; Cleveland, Beth M.; Walker, Donald M.; Salem, MohamedDiverse microbial communities colonizing the intestine of fish contribute to their growth, digestion, nutrition, and immune function. We hypothesized that fecal samples representing the gut microbiota of rainbow trout could be associated with differential growth rates observed in fish breeding programs. If true, harnessing the functionality of this microbiota can improve the profitability of aquaculture. The first objective of this study was to test this hypothesis if gut microbiota is associated with fish growth rate (body weight). Four full-sibling families were stocked in the same tank and fed an identical diet. Two fast-growing and two slow-growing fish were selected from each family for 16S rRNA microbiota profiling.Item Distinct microbial assemblages associated with genetic selection for high- and low- muscle yield in rainbow trout(Springer Nature, 2020-11-23) Chapagain, Pratima; Walker, Donald; Leeds, Tim; Cleveland, Beth M.; Salem, MohamedFish gut microbial assemblages play a crucial role in the growth rate, metabolism, and immunity of the host. We hypothesized that the gut microbiota of rainbow trout was correlated with breeding program based genetic selection for muscle yield. To test this hypothesis, fecal samples from 19 fish representing an F2 high-muscle genetic line (ARS-FY-H) and 20 fish representing an F1 low-muscle yield genetic line (ARS-FY-L) were chosen for microbiota profiling using the 16S rRNA gene. Significant differences in microbial assemblages between these two genetic lines might represent the effect of host genetic selection in structuring the gut microbiota of the host. Tukey’s transformed inverse Simpson indices indicated that high muscle yield genetic line (ARS-FY-H) samples have higher microbial diversity compared to those of the low muscle yield genetic line (ARS-FY-L) (LMM, χ2(1) =14.11, p < 0.05). The fecal samples showed statistically distinct structure in microbial assemblages between the genetic lines (F1,36 = 4.7, p < 0.05, R2 = 11.9%). Functional profiling of bacterial operational taxonomic units predicted characteristic functional capabilities of the microbial communities in the high (ARS-FY-H) and low (ARS-FY-L) muscle yield genetic line samples. The significant differences of the microbial assemblages between high (ARS-FY-H) and low (ARS-FY-L) muscle yield genetic lines indicate a possible effect of genetic selection on the microbial diversity of the host. The functional composition of taxa demonstrates a correlation between bacteria and improving the muscle accretion in the host, probably, by producing various metabolites and enzymes that might aid in digestion. Further research is required to elucidate the mechanisms involved in shaping the microbial community through host genetic selection.