Hawkeye: an interactive visual analytics tool for genome assemblies

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dc.contributor.authorSchatz, Michael C.
dc.contributor.authorPhillippy, Adam M.
dc.contributor.authorShneiderman, Ben
dc.contributor.authorSalzberg, Steven L.
dc.date.accessioned2008-06-10T18:58:44Z
dc.date.available2008-06-10T18:58:44Z
dc.date.issued2007-03-09
dc.description.abstractGenome sequencing remains an inexact science, and genome sequences can contain significant errors if they are not carefully examined. Hawkeye is our new visual analytics tool for genome assemblies, designed to aid in identifying and correcting assembly errors. Users can analyze all levels of an assembly along with summary statistics and assembly metrics, and are guided by a ranking component towards likely mis-assemblies. Hawkeye is freely available and released as part of the open source AMOS project http://amos.sourceforge.net/hawkeye.en
dc.description.urihttps://doi.org/10.1186/gb-2007-8-3-r34
dc.format.extent771926 bytes
dc.format.mimetypeapplication/pdf
dc.identifier.citationSchatz, M.C., Phillippy, A.M., Shneiderman, B. et al. Hawkeye: an interactive visual analytics tool for genome assemblies. Genome Biol 8, R34 (2007).en
dc.identifier.urihttp://hdl.handle.net/1903/7994
dc.language.isoen_USen
dc.publisherGenome Biologyen
dc.relation.isAvailableAtCollege of Computer, Mathematical & Physical Sciencesen_us
dc.relation.isAvailableAtComputer Scienceen_us
dc.relation.isAvailableAtDigital Repository at the University of Marylanden_us
dc.relation.isAvailableAtUniversity of Maryland (College Park, MD)en_us
dc.subjectgenome sequencingen
dc.subjectHawkeyeen
dc.subjectgenome assemblyen
dc.subjectAMOSen
dc.titleHawkeye: an interactive visual analytics tool for genome assembliesen
dc.typeArticleen

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