Biology
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Item Prey preference follows phylogeny: evolutionary dietary patterns within the marine gastropod group Cladobranchia (Gastropoda: Heterobranchia: Nudibranchia)(Springer Nature, 2017-10-26) Goodheart, Jessica A.; Bazinet, Adam L.; Valdés, Ángel; Collins, Allen G.; Cummings, Michael P.The impact of predator-prey interactions on the evolution of many marine invertebrates is poorly understood. Since barriers to genetic exchange are less obvious in the marine realm than in terrestrial or freshwater systems, non-allopatric divergence may play a fundamental role in the generation of biodiversity. In this context, shifts between major prey types could constitute important factors explaining the biodiversity of marine taxa, particularly in groups with highly specialized diets. However, the scarcity of marine specialized consumers for which reliable phylogenies exist hampers attempts to test the role of trophic specialization in evolution. In this study, RNA-Seq data is used to produce a phylogeny of Cladobranchia, a group of marine invertebrates that feed on a diverse array of prey taxa but mostly specialize on cnidarians. The broad range of prey type preferences allegedly present in two major groups within Cladobranchia suggest that prey type shifts are relatively common over evolutionary timescales. In the present study, we generated a well-supported phylogeny of the major lineages within Cladobranchia using RNA-Seq data, and used ancestral state reconstruction analyses to better understand the evolution of prey preference. These analyses answered several fundamental questions regarding the evolutionary relationships within Cladobranchia, including support for a clade of species from Arminidae as sister to Tritoniidae (which both preferentially prey on Octocorallia). Ancestral state reconstruction analyses supported a cladobranchian ancestor with a preference for Hydrozoa and show that the few transitions identified only occur from lineages that prey on Hydrozoa to those that feed on other types of prey. There is strong phylogenetic correlation with prey preference within Cladobranchia, suggesting that prey type specialization within this group has inertia. Shifts between different types of prey have occurred rarely throughout the evolution of Cladobranchia, indicating that this may not have been an important driver of the diversity within this group.Item Phylogenomics, Systematics, and Evolution within the Nudibranch Group Cladobranchia (Mollusca: Gastropoda)(2017) Goodheart, Jessica Ann Marie; Cummings, Michael P; Collins, Allen G; Biology; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)To truly understand evolution, we must document patterns of variation in traits – ranging from anatomical features of individuals to geographic ranges of species – to gain insights into the mechanisms that lead to changes in diversity through time. This type of work requires a robust historical context of evolutionary relationships in order to make comparisons across taxa and inferences about past events. My dissertation provides a thorough phylogenetic analysis of the marine gastropod group Cladobranchia (Mollusca) to better understand the evolution of defensive capabilities within the clade. In the absence of a protective shell, lineages within Cladobranchia have evolved a diverse array of alternative defense mechanisms, including the use of stinging organelles (nematocysts) acquired from their cnidarian prey. It has been hypothesized that incorporation of nematocysts as a defensive strategy may have been an evolutionarily important event that led to large-scale diversification within this group. As such, understanding the steps involved in the evolution of this ability is necessary for evaluating this hypothesis. A major objective for my dissertation has been to use transcriptome (RNA-Seq) data from 37 species in Cladobranchia in order to generate a well-supported phylogenetic hypothesis of Cladobranchia. This research has produced the most highly supported phylogenetic tree of Cladobranchia thus far and contributes to confidence in the efficacy of genomic data to resolve relationships among gastropod lineages. As I have been able to expand this phylogenetic hypothesis with additional taxon sampling, including molecular data from a further 60 species, I have been able to provide context for understanding the evolutionary steps that led to the ability to sequester nematocysts. This phylogeny was then combined with morphological data from 50 nematocyst sequestering species within Cladobranchia to allow for a more detailed reconstruction of the evolution of nematocyst sequestration and prey preference within this clade. Overall, this work builds knowledge of the relationships among major lineages within Cladobranchia, and has substantially increased understanding of the evolution of morphological and ecological characters in this group.Item Ecology of Juvenile Bluefish, Pomatomus saltatrix, in Maryland Coastal Waters and Chesapeake Bay(2005-12-12) Callihan, Jody; Secor, David; Marine-Estuarine-Environmental Sciences; Digital Repository at the University of Maryland; University of Maryland (College Park, Md.)Shallow coastal ocean environments may function as important nursery habitats for juvenile bluefish, yet little ecological research has been conducted in ocean habitats. This thesis examines seasonal production, growth rates, and diet composition of juveniles in Maryland's coastal ocean environment and the Chesapeake Bay estuary. Summer-spawned juveniles dominated in ocean habitats and exhibited rapid growth rates, 2.0 - 2.4 mm d-1, which were likely fueled by an abundant forage base of young-of-the-year bay anchovy present in ocean environments during late summer/early fall. This summer cohort was rare in the Chesapeake Bay, where spring-spawned juveniles dominated. These results suggest ocean habitats provide principal nurseries for summer-spawned bluefish, and that the Chesapeake Bay and other estuaries are principal nurseries for spring-spawned juveniles. Accordingly, year class strength is likely shaped by contributions of juveniles from both oceanic and estuarine nursery habitats.