B0;136;0c
############################ SPECIES ###########################
#Actin 5muM B 50nM E 50nM C 50nM Motor 0.01 Linker 0.01
SPECIESDIFFUSING: A 279283 80.0 0.0 0.0 REG
SPECIESDIFFUSING: BD 71 0.8 1.0 0.0 REG
SPECIESDIFFUSING: ED 14 0.8 1.0 0.0 REG
SPECIESDIFFUSING: CD 0 0.8 0.0 0.0 REG
SPECIESDIFFUSING: MD 1205 0.8 0.0 0.0 REG
SPECIESDIFFUSING: LD 2710 8.0 0.0 0.0 REG
#Filament
SPECIESFILAMENT: AF 0
#PlusEnd
SPECIESPLUSEND: PA 0
SPECIESPLUSEND: CA 0
SPECIESPLUSEND: ENA 0
#MinusEnd
SPECIESMINUSEND: MA 0
#Boundspecies
SPECIESBOUND: LMBEA 0 
#pair binding species
SPECIESMOTOR: MOA 0
SPECIESLINKER: LA 0
SPECIESBRANCHER: BA 0

LINKERBINDINGSITE: LMBEA 0 
MOTORBINDINGSITE: LMBEA 0
BRANCHERBINDINGSITE: LMBEA 0

########################### REACTIONS ##########################

#Normal polymerization
POLYMERIZATIONREACTION: 0 A:DIFFUSING + PA:PLUSEND -> AF:FILAMENT + PA:PLUSEND 0.154
POLYMERIZATIONREACTION: 0 A:DIFFUSING + MA:MINUSEND -> AF:FILAMENT + MA:MINUSEND 0.017

#Normal depolymerization
DEPOLYMERIZATIONREACTION: 0 AF:FILAMENT + PA:PLUSEND -> A:DIFFUSING + PA:PLUSEND 1.4
DEPOLYMERIZATIONREACTION: 0 AF:FILAMENT + MA:MINUSEND -> A:DIFFUSING + MA:MINUSEND 0.8

#Capping 
#POLYMERIZATIONREACTION: 0 CD:DIFFUSING + PA:PLUSEND + -> AF:FILAMENT + CA:PLUSEND 0.05
POLYMERIZATIONREACTION: 0 ED:DIFFUSING + PA:PLUSEND + -> AF:FILAMENT + ENA:PLUSEND 0.996

#Uncapping
#DEPOLYMERIZATIONREACTION: 0 AF:FILAMENT + CA:PLUSEND -> CD:DIFFUSING + PA:PLUSEND 0.04
DEPOLYMERIZATIONREACTION: 0 AF:FILAMENT + ENA:PLUSEND -> ED:DIFFUSING + PA:PLUSEND 0.69

#ENA polymerization 
POLYMERIZATIONREACTION: 0 A:DIFFUSING + ENA:PLUSEND -> AF:FILAMENT + ENA:PLUSEND 0.39

#Branch binding and unbinding
BRANCHINGREACTION: 0 BD:DIFFUSING + A:DIFFUSING + LMBEA:BOUND <-> BA:BRANCHER + PA:PLUSEND 0.0017 0.02 ALL 0.0

#Destruction
DESTRUCTIONREACTION: 0 PA:PLUSEND + MA:MINUSEND -> A:DIFFUSING + A:DIFFUSING 1.0

#Motor and linker binding and unbinding
MOTORREACTION: 0 LMBEA:BOUND:1 + LMBEA:BOUND:2 + MD:DIFFUSING <-> MOA:MOTOR:1 + MOA:MOTOR:2 0.2 1.0 175.0 225.0
LINKERREACTION: 0 LMBEA:BOUND:1 + LMBEA:BOUND:2 + LD:DIFFUSING <-> LA:LINKER:1 + LA:LINKER:2 0.009 0.3 30.0 40.0

#Motor walking
MOTORWALKINGREACTION: 0 MOA:MOTOR:N + LMBEA:BOUND:N+1 -> MOA:MOTOR:N+1 + LMBEA:BOUND:N 0.2
